Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | EUB48_10605 | P27103 | + | 2207492 - 2208472 | 34354.5 |
| sdr family oxidoreductase | EUB48_10610 | Q93761 | - | 2208516 - 2209412 | 32297.6 |
| fad-binding oxidoreductase | EUB48_10615 | Q54H55 | - | 2209638 - 2211014 | 50319.2 |
| duf4242 domain-containing protein | EUB48_10620 | Not Available | + | 2211263 - 2211520 | 9419.27 |
| helix-turn-helix transcriptional regulator | EUB48_10625 | Q52999 | + | 2211572 - 2214721 | 113360.0 |
| duf1059 domain-containing protein | EUB48_10630 | Not Available | - | 2215082 - 2215291 | 7809.33 |
| chromate efflux transporter | EUB48_10635 | P14285 | - | 2215698 - 2216870 | 40244.3 |
| nad-dependent dna ligase liga | EUB48_10640 | Q21WC8 | - | 2216951 - 2219023 | 75281.9 |
| cell division protein ftsz | EUB48_10645 | Not Available | - | 2219050 - 2220099 | 36627.2 |
| chromosome segregation protein smc | EUB48_10650 | A9BZW2 | - | 2220116 - 2223631 | 130242.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
