Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | EUB48_10205 | Q21WJ5 | + | 2121321 - 2124221 | 103441.0 |
| 30s ribosome-binding factor rbfa | EUB48_10210 | Q21WJ4 | + | 2124241 - 2124609 | 13672.4 |
| trna pseudouridine(55) synthase trub | EUB48_10215 | A1WLI1 | + | 2124695 - 2125654 | 34596.8 |
| translational gtpase typa | EUB48_10220 | H9L427 | + | 2125651 - 2127483 | 67352.8 |
| dmt family transporter | EUB48_10225 | Not Available | + | 2127533 - 2128471 | 33358.9 |
| anti-sigma factor | EUB48_10230 | Not Available | - | 2128527 - 2129393 | 31069.8 |
| sigma-70 family rna polymerase sigma factor | EUB48_10235 | B3Q6P8 | - | 2129411 - 2129935 | 19638.7 |
| hypothetical protein | EUB48_10240 | Not Available | - | 2129963 - 2130337 | 12971.4 |
| ssra-binding protein smpb | EUB48_10245 | Q21VE0 | - | 2130443 - 2130928 | 18430.5 |
| type ii toxin-antitoxin system rata family toxin | EUB48_10250 | A5F376 | + | 2131008 - 2131448 | 16056.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
