Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hii | EUB48_09305 | A1VN54 | + | 1932884 - 1933501 | 22380.4 |
| rna methyltransferase | EUB48_09310 | P94538 | + | 1933498 - 1934295 | 27505.4 |
| carbamoyl-phosphate synthase small subunit | EUB48_09315 | Q9JP87 | + | 1934419 - 1935609 | 42786.3 |
| carbamoyl-phosphate synthase large subunit | EUB48_09320 | Q8XZ83 | + | 1935610 - 1938843 | 117240.0 |
| transcription elongation factor grea | EUB48_09325 | A1VN58 | + | 1938943 - 1939419 | 16928.2 |
| duf4149 domain-containing protein | EUB48_09330 | Not Available | + | 1939432 - 1939854 | 15183.3 |
| 3-deoxy-d-manno-oct-2-ulosonic acid (kdo) hydroxylase | EUB48_09335 | Not Available | + | 1939934 - 1940818 | 32815.2 |
| glycosyltransferase | EUB48_09340 | Not Available | - | 1940838 - 1941608 | 29462.2 |
| yhby family rna-binding protein | EUB48_09345 | P71376 | - | 1941613 - 1942089 | 17517.5 |
| rlme family rna methyltransferase | EUB48_09350 | C5CKU4 | + | 1942088 - 1942879 | 28746.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
