Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| di-trans,poly-cis-decaprenylcistransferase | EUB48_09255 | Q7WJ90 | + | 1922495 - 1923217 | 26127.2 |
| phosphatidate cytidylyltransferase | EUB48_09260 | Q59640 | + | 1923227 - 1924072 | 30369.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EUB48_09265 | Q5NZG9 | + | 1924078 - 1925268 | 42731.8 |
| rip metalloprotease rsep | EUB48_09270 | Q8XZI4 | + | 1925287 - 1926660 | 48775.8 |
| outer membrane protein assembly factor bama | EUB48_09275 | Q9K1H0 | + | 1926705 - 1929002 | 84138.4 |
| omph family outer membrane protein | EUB48_09280 | P31519 | + | 1929002 - 1929514 | 19572.3 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | EUB48_09285 | C5CKT0 | + | 1929537 - 1930511 | 33885.9 |
| 3-hydroxyacyl-acp dehydratase fabz | EUB48_09290 | Q12A42 | + | 1930508 - 1930948 | 16602.8 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | EUB48_09295 | A1WHV4 | + | 1930961 - 1931749 | 27867.5 |
| lipid-a-disaccharide synthase | EUB48_09300 | Q21WX7 | + | 1931791 - 1932912 | 41165.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
