Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EUB48_08305 | Not Available | + | 1731307 - 1731399 | 3049.63 |
| squalene synthase hpnd | EUB48_08310 | P37269 | - | 1731399 - 1732268 | 32650.4 |
| squalene synthase hpnc | EUB48_08315 | P55351 | - | 1732279 - 1733103 | 30611.8 |
| Trna-leu | Not Available | Not Available | + | 1733285 - 1733370 | Not Available |
| trigger factor | EUB48_08325 | Q12BY3 | + | 1733404 - 1734714 | 48305.7 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | EUB48_08330 | B9MG14 | + | 1734820 - 1735464 | 23503.2 |
| atp-dependent clp protease atp-binding subunit clpx | EUB48_08335 | Q21Y66 | + | 1735572 - 1736837 | 46173.7 |
| endopeptidase la | EUB48_08340 | P74956 | + | 1736939 - 1739374 | 89253.6 |
| Trna-gly | Not Available | Not Available | + | 1739426 - 1739501 | Not Available |
| Trna-cys | Not Available | Not Available | + | 1739560 - 1739633 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
