Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase molybdopterin binding subunit | EUB48_07005 | Q6AUV1 | - | 1453459 - 1455891 | 87481.7 |
| xanthine dehydrogenase small subunit | EUB48_07010 | Q12553 | - | 1455893 - 1457485 | 57098.4 |
| ncs2 family permease | EUB48_07015 | Q57772 | + | 1457688 - 1458803 | 39016.9 |
| thioredoxin | EUB48_07020 | Q9RD25 | + | 1458856 - 1459257 | 14414.1 |
| cytochrome p450 | EUB48_07025 | C4B644 | - | 1459220 - 1460563 | 48552.0 |
| alpha/beta hydrolase | EUB48_07030 | P27747 | - | 1460570 - 1461397 | 28783.8 |
| o-acetylhomoserine aminocarboxypropyltransferase | EUB48_07035 | P94890 | - | 1461400 - 1462716 | 46538.6 |
| cbs domain-containing protein | EUB48_07040 | Q9LEV3 | + | 1462878 - 1463333 | 16815.5 |
| hypothetical protein | EUB48_07045 | B4T9U3 | - | 1463335 - 1464047 | 25975.9 |
| copg family transcriptional regulator | EUB48_07050 | Not Available | + | 1464209 - 1464643 | 15432.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
