Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase | EUB48_06805 | B2U886 | - | 1417080 - 1419089 | 71256.0 |
| prephenate dehydrogenase/arogenate dehydrogenase family protein | EUB48_06810 | P20692 | - | 1419090 - 1419968 | 31269.0 |
| prephenate dehydratase | EUB48_06815 | Q9ZHY3 | - | 1419996 - 1421078 | 39004.4 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EUB48_06820 | A1TSA3 | - | 1421082 - 1422188 | 40105.0 |
| duf2059 domain-containing protein | EUB48_06825 | Not Available | - | 1422185 - 1422754 | 19814.1 |
| dna gyrase subunit a | EUB48_06830 | P37411 | - | 1422751 - 1425396 | 97892.2 |
| ompa family protein | EUB48_06835 | Q05146 | + | 1425620 - 1426252 | 21976.3 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | EUB48_06840 | Q21UL3 | + | 1426331 - 1427047 | 25841.1 |
| had family hydrolase | EUB48_06845 | Q4UVL3 | + | 1427051 - 1427734 | 24325.2 |
| Tmrna,resume consensus sequence (at 86): actaactgcaaacgacga | Not Available | Not Available | + | 1427747 - 1428125 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
