Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EUB48_06755 | P77559 | - | 1406008 - 1406928 | 33878.1 |
| dna alkylation response protein | EUB48_06760 | Q9XWZ2 | + | 1407026 - 1408771 | 62730.5 |
| tripartite tricarboxylate transporter substrate binding protein | EUB48_06765 | Q45389 | + | 1408858 - 1409832 | 33602.1 |
| coa transferase | EUB48_06770 | Q7CXU0 | + | 1409872 - 1410990 | 39831.8 |
| hypothetical protein | EUB48_06775 | Q52991 | - | 1411242 - 1412510 | 47440.5 |
| helix-hairpin-helix domain-containing protein | EUB48_06780 | Not Available | - | 1412626 - 1413165 | 17678.1 |
| lipopolysaccharide assembly protein lapb | EUB48_06785 | P0AB60 | - | 1413325 - 1414488 | 43150.1 |
| lapa family protein | EUB48_06790 | Not Available | - | 1414478 - 1414768 | 10554.0 |
| integration host factor subunit beta | EUB48_06795 | Q8Y0Y3 | - | 1414814 - 1415128 | 11645.9 |
| 30s ribosomal protein s1 | EUB48_06800 | Q9JZ44 | - | 1415216 - 1416901 | 61781.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
