Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | EUB48_06055 | C5CYZ4 | - | 1261635 - 1262501 | 31046.3 |
| outer membrane lipoprotein lolb | EUB48_06060 | A9I6X6 | - | 1262523 - 1263023 | 17813.2 |
| tetratricopeptide repeat protein | EUB48_06065 | P42810 | - | 1263020 - 1264768 | 63425.7 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | EUB48_06070 | C5CYZ1 | + | 1264809 - 1265624 | 29325.8 |
| dynamin family protein | EUB48_06075 | P40983 | + | 1265763 - 1267637 | 69509.3 |
| a/g-specific adenine glycosylase | EUB48_06080 | P17802 | + | 1267634 - 1268677 | 38218.4 |
| rnase adapter rapz | EUB48_06085 | Q21XX0 | - | 1268696 - 1269610 | 33753.4 |
| dna repair protein recn | EUB48_06090 | A5F379 | - | 1269666 - 1271336 | 59552.6 |
| nad kinase | EUB48_06095 | Q21XX2 | - | 1271339 - 1272235 | 32256.9 |
| heat-inducible transcriptional repressor hrca | EUB48_06100 | A1TT56 | + | 1272264 - 1273268 | 36869.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
