Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | + | 1182115 - 1182199 | Not Available |
| cysteine synthase cysm | EUB48_05710 | Q9I526 | + | 1182239 - 1183141 | 32673.2 |
| nudix hydrolase | EUB48_05715 | A4VLQ5 | + | 1183138 - 1183665 | 19744.5 |
| tripartite tricarboxylate transporter substrate binding protein | EUB48_05720 | P27103 | - | 1183767 - 1184759 | 34096.9 |
| rna polymerase sigma factor rpoh | EUB48_05725 | P44404 | - | 1184808 - 1185743 | 34474.4 |
| decarboxylating 6-phosphogluconate dehydrogenase | EUB48_05730 | G5EBD7 | + | 1186063 - 1187082 | 36257.4 |
| glucose-6-phosphate dehydrogenase | EUB48_05735 | P0A587 | + | 1187095 - 1188483 | 50775.6 |
| had family hydrolase | EUB48_05740 | Not Available | + | 1188480 - 1189187 | 27085.6 |
| transaldolase | EUB48_05745 | B8GMX9 | + | 1189184 - 1190290 | 39257.5 |
| glucose-6-phosphate isomerase | EUB48_05750 | Q2YBU4 | + | 1190287 - 1191942 | 61644.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
