Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tryptophan--trna ligase | EUB48_05105 | Q8PFH5 | - | 1061144 - 1062445 | 46885.1 |
| site-2 protease family protein | EUB48_05110 | P70995 | - | 1062467 - 1063138 | 24333.7 |
| threonylcarbamoyl-amp synthase | EUB48_05115 | P0AFR5 | - | 1063151 - 1063810 | 23741.7 |
| dmt family transporter | EUB48_05120 | Q1MIM3 | - | 1063837 - 1064676 | 30722.6 |
| php domain-containing protein | EUB48_05125 | Q7NXD4 | - | 1064739 - 1065593 | 30573.9 |
| chad domain-containing protein | EUB48_05130 | Not Available | + | 1065664 - 1066665 | 36696.5 |
| glutathione s-transferase | EUB48_05135 | Q9P6M1 | + | 1066770 - 1067441 | 24820.2 |
| thermonuclease family protein | EUB48_05140 | Q2RBJ2 | + | 1067481 - 1068002 | 19466.1 |
| single-stranded-dna-specific exonuclease recj | EUB48_05145 | P39693 | - | 1068096 - 1069805 | 61288.1 |
| phosphoglycerate mutase | EUB48_05150 | Not Available | - | 1069802 - 1070752 | 34373.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
