Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase | EUB48_04905 | Q8U0Z8 | + | 1015276 - 1015806 | 19044.3 |
| methionine--trna ligase | EUB48_04910 | A1TTU1 | - | 1015803 - 1017884 | 77039.0 |
| endopeptidase la | EUB48_04915 | B8EMF2 | + | 1018171 - 1020546 | 86061.2 |
| hypothetical protein | EUB48_04920 | P96595 | + | 1020557 - 1020748 | 7169.8 |
| iron-sulfur cluster carrier protein apbc | EUB48_04925 | P72190 | + | 1020871 - 1021962 | 38411.9 |
| benzoate-coa ligase family protein | EUB48_04930 | Q8GQN9 | - | 1022044 - 1023672 | 58322.5 |
| 3,4-dehydroadipyl-coa semialdehyde dehydrogenase | EUB48_04935 | Q84HH8 | - | 1023706 - 1025268 | 54116.8 |
| helix-turn-helix domain-containing protein | EUB48_04940 | Q3AH55 | + | 1025466 - 1026389 | 33714.7 |
| benzoyl-coa-dihydrodiol lyase | EUB48_04945 | Q84HH6 | + | 1026538 - 1028196 | 60054.9 |
| benzoyl-coa 2,3-epoxidase subunit boxb | EUB48_04950 | Q9AIX7 | + | 1028257 - 1029684 | 53626.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
