Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome biogenesis protein ccsb | EUB48_03755 | A5GTF4 | + | 783974 - 785389 | 52153.2 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | EUB48_03760 | Q8XV50 | + | 785447 - 786445 | 36943.6 |
| sulfoxide reductase heme-binding subunit yedz | EUB48_03765 | A1VK09 | + | 786454 - 787098 | 24313.8 |
| diaminopimelate decarboxylase | EUB48_03770 | P19572 | - | 787134 - 788453 | 46661.8 |
| hypothetical protein | EUB48_03775 | Not Available | - | 788450 - 788665 | 6905.36 |
| iron donor protein cyay | EUB48_03780 | C5CQG3 | + | 788738 - 789067 | 12004.0 |
| penicillin-binding protein 1a | EUB48_03785 | O87626 | - | 789070 - 791478 | 87698.7 |
| pilus assembly protein pilm | EUB48_03790 | G3XD28 | + | 791739 - 792818 | 38967.7 |
| fimbrial protein | EUB48_03795 | G3XD30 | + | 792815 - 793456 | 23124.6 |
| pilus assembly protein pilo | EUB48_03800 | G3XD51 | + | 793469 - 794143 | 24686.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
