Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yajq family cyclic di-gmp-binding protein | EUB48_16855 | C5CUU9 | + | 3491344 - 3491829 | 18007.8 |
| tigr02281 family clan aa aspartic protease | EUB48_16860 | P29938 | + | 3491940 - 3492506 | 19736.6 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | EUB48_16865 | Q21UZ2 | - | 3492508 - 3493128 | 22025.5 |
| aminoacyl-trna deacylase | EUB48_16870 | P45202 | - | 3493159 - 3493650 | 17675.5 |
| ompa family protein | EUB48_16875 | P37665 | + | 3493916 - 3494581 | 22209.2 |
| amp-binding protein | EUB48_16880 | C0SPB0 | - | 3494621 - 3496429 | 64703.4 |
| alpha/beta hydrolase | EUB48_16885 | A2BGU9 | + | 3496545 - 3497486 | 34945.6 |
| peptide chain release factor 2 | EUB48_16890 | C5CUX0 | + | 3497524 - 3498628 | 41230.2 |
| aminopeptidase n | EUB48_16895 | Q8H0S9 | + | 3498686 - 3501391 | 99621.3 |
| class 1 fructose-bisphosphatase | EUB48_16900 | A9BW85 | + | 3501415 - 3502422 | 36995.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
