Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | EUB48_16405 | A1WBJ3 | + | 3401246 - 3401929 | 25596.5 |
| adp-forming succinate--coa ligase subunit beta | EUB48_16410 | Q21RF9 | + | 3401989 - 3403152 | 41038.9 |
| succinate--coa ligase subunit alpha | EUB48_16415 | P80865 | + | 3403166 - 3404059 | 31029.9 |
| 4-oxalocrotonate tautomerase | EUB48_16420 | Q9PCQ3 | + | 3404109 - 3404330 | 8177.84 |
| peroxidase | EUB48_16425 | Not Available | + | 3404350 - 3404904 | 20265.2 |
| aldo/keto reductase | EUB48_16430 | P77735 | - | 3404983 - 3406008 | 37554.5 |
| carboxymuconolactone decarboxylase family protein | EUB48_16435 | P20370 | - | 3406032 - 3406364 | 12035.4 |
| sdr family nad(p)-dependent oxidoreductase | EUB48_16440 | A6SSW9 | - | 3406431 - 3407267 | 29380.2 |
| mfs transporter | EUB48_16445 | P59194 | - | 3407438 - 3408652 | 41173.4 |
| lysr family transcriptional regulator | EUB48_16450 | Q01610 | + | 3408783 - 3409676 | 33216.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
