Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | EUB48_16255 | P27103 | - | 3366470 - 3367513 | 36377.5 |
| sdr family oxidoreductase | EUB48_16260 | P73574 | + | 3367668 - 3368726 | 36972.4 |
| group ii intron reverse transcriptase/maturase | EUB48_16265 | Q47688 | - | 3369015 - 3370523 | 57119.0 |
| branched-chain amino acid abc transporter substrate-binding protein | EUB48_16270 | P21175 | + | 3370924 - 3372138 | 43656.9 |
| branched-chain amino acid abc transporter permease | EUB48_16275 | P21627 | + | 3372207 - 3373130 | 31953.6 |
| branched-chain amino acid abc transporter atp-binding protein/permease | EUB48_16280 | P0A194 | + | 3373127 - 3374950 | 64221.1 |
| abc transporter atp-binding protein | EUB48_16285 | P21630 | + | 3374943 - 3375653 | 25402.1 |
| amidohydrolase | EUB48_16290 | P55567 | + | 3375702 - 3376772 | 39802.4 |
| amidohydrolase | EUB48_16295 | P55567 | + | 3377045 - 3378145 | 39742.4 |
| sdr family oxidoreductase | EUB48_16300 | Q9X248 | + | 3378229 - 3378993 | 26626.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
