Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | EUB48_15955 | P0AEX8 | - | 3308362 - 3310275 | 67527.6 |
| hypothetical protein | EUB48_15960 | P21630 | - | 3310309 - 3311051 | 26942.2 |
| abc transporter atp-binding protein | EUB48_15965 | P21629 | - | 3311044 - 3311796 | 27256.2 |
| abc transporter substrate-binding protein | EUB48_15970 | Not Available | - | 3311840 - 3313045 | 42725.3 |
| amidohydrolase | EUB48_15975 | P55567 | + | 3313323 - 3314399 | 39710.1 |
| tripartite tricarboxylate transporter substrate binding protein | EUB48_15980 | P27103 | - | 3314603 - 3315565 | 34090.4 |
| lysr family transcriptional regulator | EUB48_15985 | Q04778 | - | 3315588 - 3316520 | 33669.1 |
| mmge/prpd family protein | EUB48_15990 | P54956 | - | 3316532 - 3317890 | 47883.1 |
| hypothetical protein | EUB48_15995 | P0A177 | + | 3318090 - 3318374 | 9795.82 |
| hypothetical protein | EUB48_16000 | B3EWP1 | + | 3318374 - 3318922 | 19448.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
