Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dethiobiotin synthase | EUB48_15455 | Q39CE5 | - | 3206035 - 3206694 | 23198.1 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | EUB48_15460 | P22805 | - | 3206691 - 3208016 | 47810.1 |
| aspartate 1-decarboxylase | EUB48_15465 | A9BV13 | - | 3208018 - 3208398 | 14076.9 |
| chorismate lyase | EUB48_15470 | Q21U27 | - | 3208310 - 3209050 | 28104.5 |
| aminodeoxychorismate synthase component i | EUB48_15475 | P12680 | - | 3209068 - 3210690 | 59272.6 |
| l-aspartate oxidase | EUB48_15480 | Q8XWM7 | - | 3210882 - 3212528 | 59675.9 |
| carboxylating nicotinate-nucleotide diphosphorylase | EUB48_15485 | P30819 | + | 3212589 - 3213491 | 31773.7 |
| quinolinate synthase nada | EUB48_15490 | A4G431 | + | 3213476 - 3214585 | 40160.4 |
| is5 family transposase | EUB48_15495 | P50358 | - | 3214718 - 3215481 | 28842.1 |
| duf3375 family protein | EUB48_15500 | Not Available | - | 3215524 - 3215859 | 12318.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
