Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | EUB48_15055 | Q0K844 | + | 3120425 - 3121942 | 54066.5 |
| hypothetical protein | EUB48_15060 | P0A954 | - | 3121974 - 3122280 | 11764.8 |
| helix-turn-helix domain-containing protein | EUB48_15065 | Not Available | - | 3122850 - 3123305 | 17166.7 |
| taurine abc transporter substrate-binding protein | EUB48_15070 | Q8YDR6 | - | 3123619 - 3124665 | 36816.5 |
| crp/fnr family transcriptional regulator | EUB48_15075 | P29283 | - | 3124823 - 3125536 | 26261.0 |
| thiamine pyrophosphate-binding protein | EUB48_15080 | Q8TKU6 | + | 3125602 - 3126132 | 19563.5 |
| thiamine pyrophosphate-binding protein | EUB48_15085 | O86938 | + | 3126143 - 3126736 | 21104.3 |
| glucose-methanol-choline oxidoreductase | EUB48_15090 | Q6LGH5 | + | 3126741 - 3128360 | 58296.6 |
| mfs transporter | EUB48_15095 | A0LNN5 | - | 3128406 - 3129698 | 45317.3 |
| glycolate oxidase subunit glcf | EUB48_15100 | P52074 | - | 3129664 - 3130914 | 44698.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
