Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate o-methyltransferase | EUB48_14805 | A0LL58 | + | 3063033 - 3063698 | 24392.7 |
| sulfurtransferase | EUB48_14810 | Q93WI0 | + | 3063746 - 3064087 | 12274.6 |
| 3-deoxy-d-manno-octulosonic acid transferase | EUB48_14815 | Q45374 | - | 3064097 - 3065365 | 45061.4 |
| phosphomannomutase/phosphoglucomutase | EUB48_14820 | P40390 | - | 3065395 - 3066777 | 49267.5 |
| dna-3-methyladenine glycosylase 2 family protein | EUB48_14825 | P9WJW2 | + | 3066893 - 3068545 | 59667.9 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EUB48_14830 | P0A697 | + | 3068574 - 3069104 | 18709.4 |
| dmt family transporter | EUB48_14835 | P96680 | + | 3069197 - 3070051 | 29636.4 |
| duf1345 domain-containing protein | EUB48_14840 | Not Available | - | 3070081 - 3070740 | 24366.2 |
| merr family transcriptional regulator | EUB48_14845 | Q50900 | - | 3070779 - 3071732 | 34659.0 |
| fad-dependent oxidoreductase | EUB48_14850 | P63534 | + | 3072005 - 3073309 | 48082.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
