Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | EUB48_14755 | Not Available | - | 3053294 - 3054598 | 48091.7 |
| lactoylglutathione lyase | EUB48_14760 | P0AC82 | + | 3054955 - 3055365 | 14762.6 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | EUB48_14765 | P38448 | - | 3055433 - 3056074 | 22080.1 |
| phosphogluconate dehydratase | EUB48_14770 | P31961 | - | 3056065 - 3058050 | 68939.1 |
| gamma-glutamylcyclotransferase | EUB48_14775 | P39163 | + | 3058210 - 3058815 | 22774.3 |
| nucleotidyltransferase family protein | EUB48_14780 | O32146 | - | 3058835 - 3059368 | 18239.1 |
| pyridoxamine 5'-phosphate oxidase | EUB48_14785 | Q126S5 | + | 3059430 - 3060080 | 24732.1 |
| peptide-methionine (s)-s-oxide reductase | EUB48_14790 | Q97Y45 | - | 3060114 - 3060653 | 20232.5 |
| lysr family transcriptional regulator | EUB48_14795 | P77559 | - | 3060694 - 3061596 | 32821.0 |
| acyl-coa dehydrogenase | EUB48_14800 | Q2KHZ9 | + | 3061753 - 3062949 | 43705.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
