Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamine--trna ligase/yqey domain fusion protein | EUB48_14455 | B2U846 | + | 2994062 - 2995867 | 66909.1 |
| is630 family transposase | EUB48_14460 | P16943 | - | 2995995 - 2997077 | 41239.8 |
| dna repair protein | EUB48_14465 | Not Available | + | 2997366 - 2998082 | 27255.6 |
| type ii toxin-antitoxin system rele/pare family toxin | EUB48_14470 | Not Available | + | 2998163 - 2998489 | 12201.0 |
| xre family transcriptional regulator | EUB48_14475 | Not Available | + | 2998486 - 2998782 | 10752.3 |
| class i sam-dependent dna methyltransferase | EUB48_14480 | O31504 | + | 2998897 - 3001683 | 104159.0 |
| hypothetical protein | EUB48_14485 | Q87AD4 | + | 3001774 - 3002247 | 16914.9 |
| yeee/yede family protein | EUB48_14490 | Q87AD3 | + | 3002244 - 3002702 | 15891.9 |
| isoprenylcysteine carboxylmethyltransferase family protein | EUB48_14495 | P43953 | - | 3002672 - 3003133 | 16623.8 |
| nyn domain-containing protein | EUB48_14500 | Not Available | - | 3003145 - 3003897 | 27519.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
