Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | EUB48_14155 | Q21YC9 | - | 2932782 - 2933531 | 25240.4 |
| nad(p)h-quinone oxidoreductase | EUB48_14160 | Q53FA7 | - | 2933536 - 2934522 | 33858.1 |
| polyribonucleotide nucleotidyltransferase | EUB48_14165 | Q21YD1 | - | 2934584 - 2936728 | 77379.2 |
| 30s ribosomal protein s15 | EUB48_14170 | A1WLP9 | - | 2936936 - 2937202 | 9914.14 |
| pyridoxal phosphate-dependent aminotransferase | EUB48_14175 | O58489 | - | 2937287 - 2938459 | 42505.3 |
| hypothetical protein | EUB48_14180 | Not Available | + | 2938588 - 2938857 | 9529.59 |
| branched-chain amino acid abc transporter substrate-binding protein | EUB48_14185 | Q8YDV4 | - | 2938888 - 2940171 | 46448.8 |
| hsp20 family protein | EUB48_14190 | P30222 | + | 2940267 - 2940638 | 13430.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | EUB48_14195 | C5CT30 | - | 2940698 - 2941750 | 36546.6 |
| dna starvation/stationary phase protection protein | EUB48_14200 | P73321 | + | 2941909 - 2942454 | 20308.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
