Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hsp20/alpha crystallin family protein | EUB48_13755 | Q4UKR8 | - | 2859429 - 2859686 | 9417.21 |
| ybfb/yjij family mfs transporter | EUB48_13760 | P39381 | - | 2859702 - 2860853 | 38952.7 |
| atp-binding cassette domain-containing protein | EUB48_13765 | Q48GL0 | - | 2860882 - 2861469 | 21310.4 |
| nadh oxidase | EUB48_13770 | Q3MIE4 | + | 2861609 - 2862751 | 39983.4 |
| pyridoxamine 5'-phosphate oxidase family protein | EUB48_13775 | Not Available | - | 2862883 - 2863335 | 16748.5 |
| class i sam-dependent methyltransferase | EUB48_13780 | A4XPM7 | + | 2863684 - 2864502 | 29110.7 |
| pyridoxamine 5'-phosphate oxidase | EUB48_13785 | Q9KL41 | - | 2864578 - 2865072 | 17669.4 |
| methyltransferase domain-containing protein | EUB48_13790 | Q0WP12 | - | 2865106 - 2865717 | 22943.5 |
| hypothetical protein | EUB48_13795 | Not Available | - | 2865761 - 2866171 | 14089.3 |
| abc transporter permease | EUB48_13800 | O53900 | + | 2866248 - 2868809 | 88878.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
