Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerd | EUB48_13655 | Q8XWD0 | - | 2837349 - 2838254 | 33639.9 |
| aec family transporter | EUB48_13660 | O27435 | + | 2838303 - 2839208 | 32143.6 |
| trna epoxyqueuosine(34) reductase queg | EUB48_13665 | F4G4E2 | - | 2839284 - 2840345 | 39164.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | EUB48_13670 | P0AF68 | + | 2840379 - 2840861 | 18060.5 |
| n-acetylmuramoyl-l-alanine amidase | EUB48_13675 | P63884 | + | 2840858 - 2842300 | 51213.3 |
| marr family transcriptional regulator | EUB48_13680 | P69782 | + | 2842554 - 2843042 | 18442.6 |
| abc transporter substrate-binding protein | EUB48_13685 | P55669 | + | 2843124 - 2844704 | 58455.6 |
| abc transporter permease | EUB48_13690 | Q53191 | + | 2844727 - 2845668 | 33812.7 |
| abc transporter permease | EUB48_13695 | Q8VQK5 | + | 2845727 - 2846635 | 32447.6 |
| abc transporter atp-binding protein | EUB48_13700 | Q6D3A9 | + | 2846664 - 2848307 | 59252.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
