Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | EUB48_13505 | Q885J3 | + | 2810288 - 2810773 | 18045.7 |
| pyridine nucleotide-disulfide oxidoreductase | EUB48_13510 | Q96NN9 | + | 2810991 - 2812550 | 55322.9 |
| duf488 domain-containing protein | EUB48_13515 | P76243 | + | 2812547 - 2812918 | 14197.1 |
| carboxymuconolactone decarboxylase family protein | EUB48_13520 | P96684 | + | 2812930 - 2813388 | 17217.6 |
| carboxymuconolactone decarboxylase family protein | EUB48_13525 | P08304 | + | 2813434 - 2813781 | 12113.6 |
| dna topoisomerase iv subunit a | EUB48_13530 | P48374 | - | 2813798 - 2816140 | 84913.0 |
| type iia dna topoisomerase subunit b | EUB48_13535 | P0A2I6 | - | 2816158 - 2818137 | 71894.1 |
| sdr family oxidoreductase | EUB48_13540 | P0DKC7 | + | 2818300 - 2819112 | 28580.9 |
| class i sam-dependent methyltransferase | EUB48_13545 | Q6D3C1 | + | 2819096 - 2819689 | 21271.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EUB48_13550 | B9MER6 | + | 2819724 - 2820605 | 31369.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
