Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | EUB48_13405 | Q8G3D4 | - | 2786761 - 2787957 | 42774.6 |
| glucose 1-dehydrogenase | EUB48_13410 | Q9X248 | - | 2788050 - 2788826 | 26631.2 |
| fad-dependent oxidoreductase | EUB48_13415 | P71864 | - | 2788865 - 2790625 | 62338.0 |
| iclr family transcriptional regulator | EUB48_13420 | P22866 | + | 2790787 - 2791560 | 27404.5 |
| alpha-e domain-containing protein | EUB48_13425 | P9WL96 | - | 2791682 - 2792656 | 36902.0 |
| circularly permuted type 2 atp-grasp protein | EUB48_13430 | Q55587 | - | 2792659 - 2794191 | 56826.4 |
| dna internalization-related competence protein comec/rec2 | EUB48_13435 | P51973 | - | 2794273 - 2796741 | 88138.1 |
| hypothetical protein | EUB48_13440 | Not Available | + | 2796740 - 2797674 | 33640.7 |
| dihydroxy-acid dehydratase | EUB48_13445 | Q92RP0 | + | 2797715 - 2799478 | 62426.6 |
| aldo/keto reductase | EUB48_13450 | Q40648 | - | 2799489 - 2800469 | 36326.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
