Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | EUB48_13305 | P21627 | + | 2763485 - 2764540 | 36668.1 |
| branched-chain amino acid abc transporter atp-binding protein/permease | EUB48_13310 | P0A9S8 | + | 2764540 - 2766381 | 64925.6 |
| abc transporter atp-binding protein | EUB48_13315 | P21630 | + | 2766378 - 2767127 | 26620.7 |
| mechanosensitive ion channel | EUB48_13320 | P77338 | - | 2767146 - 2768429 | 46115.2 |
| histone deacetylase family protein | EUB48_13325 | O30107 | - | 2768445 - 2769398 | 34989.8 |
| moxr family atpase | EUB48_13330 | P94474 | + | 2769452 - 2770372 | 33232.1 |
| duf58 domain-containing protein | EUB48_13335 | Not Available | + | 2770417 - 2771400 | 36016.6 |
| duf3488 domain-containing protein | EUB48_13340 | Q9HZX3 | + | 2771927 - 2773933 | 73674.7 |
| lytic murein transglycosylase b | EUB48_13345 | P41052 | + | 2773933 - 2775021 | 39040.9 |
| ethd family reductase | EUB48_13350 | Not Available | - | 2775054 - 2775749 | 26420.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
