Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| four-carbon acid sugar kinase family protein | EUB48_12905 | B1G889 | + | 2679543 - 2680886 | 46772.2 |
| hypothetical protein | EUB48_12910 | P40289 | - | 2680817 - 2681179 | 13051.5 |
| aldo/keto reductase | EUB48_12915 | A2XRZ0 | - | 2681269 - 2682273 | 35731.0 |
| gfo/idh/moca family oxidoreductase | EUB48_12920 | Q9KWL3 | - | 2682389 - 2683354 | 35119.1 |
| protocatechuate 3,4-dioxygenase | EUB48_12925 | P22636 | - | 2683351 - 2684217 | 31371.5 |
| protocatechuate 4,5-dioxygenase subunit alpha | EUB48_12930 | P22635 | - | 2684219 - 2684671 | 16711.8 |
| 2-pyrone-4,6-dicarboxylate hydrolase | EUB48_12935 | Q93PS7 | - | 2684673 - 2685599 | 34395.9 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | EUB48_12940 | Q9AQI0 | - | 2685609 - 2686298 | 24397.8 |
| amidohydrolase | EUB48_12945 | G2IQQ5 | - | 2686318 - 2687346 | 38508.0 |
| lysr family transcriptional regulator | EUB48_12950 | Q08597 | + | 2687600 - 2688508 | 32347.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
