Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa lyase | EUB48_12855 | O34873 | - | 2669048 - 2669992 | 33199.2 |
| lysr family transcriptional regulator | EUB48_12860 | P0ACR7 | + | 2670149 - 2671057 | 33234.3 |
| abc transporter substrate-binding protein | EUB48_12865 | A0A0A1H8I4 | + | 2671299 - 2671988 | 23773.6 |
| duf1801 domain-containing protein | EUB48_12870 | Not Available | + | 2671969 - 2672490 | 19125.9 |
| tyrosine-protein phosphatase | EUB48_12875 | P40289 | - | 2672581 - 2673333 | 27270.9 |
| laci family dna-binding transcriptional regulator | EUB48_12880 | Q9K6K2 | - | 2673480 - 2674544 | 38484.6 |
| trap transporter substrate-binding protein | EUB48_12885 | P44542 | + | 2674661 - 2675689 | 37380.9 |
| trap transporter large permease subunit | EUB48_12890 | P55571 | + | 2675788 - 2677695 | 67002.4 |
| voc family protein | EUB48_12895 | Not Available | + | 2677724 - 2678263 | 20289.8 |
| ribulose 1,5-bisphosphate carboxylase | EUB48_12900 | Q7WNK2 | + | 2678275 - 2679540 | 45477.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
