Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dethiobiotin synthase | EUB48_12555 | Q39CE5 | + | 2603169 - 2603828 | 23198.1 |
| 8-amino-7-oxononanoate synthase | EUB48_12560 | Q12F38 | + | 2603825 - 2605072 | 44204.2 |
| biotin synthase biob | EUB48_12565 | Q12F39 | + | 2605101 - 2606129 | 37052.5 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | EUB48_12570 | A2SEX8 | + | 2606138 - 2606956 | 28873.1 |
| pantoate--beta-alanine ligase | EUB48_12575 | C5CWV0 | + | 2606977 - 2607828 | 31234.6 |
| hypothetical protein | EUB48_12580 | Not Available | + | 2607836 - 2608072 | 9086.34 |
| hypothetical protein | EUB48_12585 | Not Available | - | 2608138 - 2608926 | 29638.5 |
| Trna-his | Not Available | Not Available | + | 2609040 - 2609115 | Not Available |
| peptidyl-prolyl cis-trans isomerase | EUB48_12595 | Q7VKX4 | - | 2609144 - 2611081 | 70528.9 |
| Trna-val | Not Available | Not Available | + | 2611141 - 2611216 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
