Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sufs family cysteine desulfurase | EUB48_12455 | O32164 | - | 2581604 - 2582860 | 44482.1 |
| sufbd protein | EUB48_12460 | Q55792 | - | 2582853 - 2584103 | 44113.5 |
| fe-s cluster assembly atpase sufc | EUB48_12465 | P77499 | - | 2584108 - 2584881 | 27207.9 |
| fe-s cluster assembly protein sufb | EUB48_12470 | Q55790 | - | 2584902 - 2586356 | 53290.1 |
| heme-binding protein | EUB48_12475 | P0AEQ2 | - | 2586578 - 2586985 | 13849.8 |
| bax inhibitor-1/ycca family protein | EUB48_12480 | Q9KSA1 | + | 2587169 - 2587870 | 24671.1 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EUB48_12485 | Q21UR3 | - | 2587920 - 2589341 | 51797.6 |
| rna polymerase sigma factor rpos | EUB48_12490 | P45684 | - | 2589383 - 2590396 | 37744.8 |
| lysm peptidoglycan-binding domain-containing protein | EUB48_12495 | P45682 | - | 2590402 - 2591292 | 30634.6 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | EUB48_12500 | A2SF76 | - | 2591304 - 2592101 | 28126.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
