Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit alpha | EUB48_12155 | Q12BQ7 | - | 2526552 - 2526881 | 12122.6 |
| phenylalanine--trna ligase subunit beta | EUB48_12160 | Q8XZ24 | - | 2526927 - 2529344 | 87509.5 |
| phenylalanine--trna ligase subunit alpha | EUB48_12165 | A9C3D0 | - | 2529363 - 2530439 | 39614.2 |
| 50s ribosomal protein l20 | EUB48_12170 | B9MHY1 | - | 2530541 - 2530900 | 13482.7 |
| 50s ribosomal protein l35 | EUB48_12175 | Q12BR1 | - | 2530926 - 2531129 | 7524.55 |
| translation initiation factor if-3 | EUB48_12180 | Q8XZ28 | - | 2531274 - 2531909 | 23947.3 |
| threonine--trna ligase | EUB48_12185 | Q12BR3 | - | 2532017 - 2533924 | 71526.5 |
| septal ring lytic transglycosylase rlpa family protein | EUB48_12190 | Q9JSM7 | + | 2534175 - 2534717 | 18360.0 |
| isocitrate lyase | EUB48_12195 | P51066 | - | 2534803 - 2536122 | 48267.0 |
| dmt family transporter | EUB48_12200 | O31540 | + | 2536583 - 2537524 | 33098.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
