Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| maleylacetoacetate isomerase | EUB48_11955 | O86043 | - | 2484899 - 2485537 | 23802.7 |
| mfs transporter | EUB48_11960 | P17583 | + | 2485653 - 2486597 | 32735.9 |
| sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein | EUB48_11965 | Q9I6P6 | - | 2486635 - 2488590 | 71753.2 |
| shikimate dehydrogenase | EUB48_11970 | A5G270 | - | 2488602 - 2489435 | 29287.4 |
| mfs transporter | EUB48_11975 | A4QH18 | - | 2489461 - 2490810 | 47864.0 |
| tetr/acrr family transcriptional regulator | EUB48_11980 | Q88FX7 | + | 2491014 - 2491604 | 22367.9 |
| antibiotic biosynthesis monooxygenase | EUB48_11985 | O31484 | + | 2491629 - 2491931 | 11314.6 |
| marr family transcriptional regulator | EUB48_11990 | Q7ABA6 | - | 2491999 - 2492439 | 16393.7 |
| 3-hydroxybenzoate 6-monooxygenase | EUB48_11995 | Q3S4B7 | + | 2492549 - 2493745 | 43732.2 |
| fad-dependent oxidoreductase | EUB48_12000 | Not Available | + | 2493751 - 2495115 | 47951.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
