Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iscs subfamily cysteine desulfurase | EUB48_11755 | Q47EN5 | - | 2436474 - 2437694 | 44820.8 |
| fe-s cluster assembly transcriptional regulator iscr | EUB48_11760 | Q2NS30 | - | 2437743 - 2438279 | 19280.4 |
| excinuclease abc subunit uvrb | EUB48_11765 | Q473K3 | - | 2438493 - 2440694 | 82374.7 |
| rida family protein | EUB48_11770 | O96876 | + | 2441089 - 2441574 | 17037.6 |
| aspartate/tyrosine/aromatic aminotransferase | EUB48_11775 | P72173 | + | 2441676 - 2442866 | 42577.4 |
| 4,5-dopa dioxygenase extradiol | EUB48_11780 | P24197 | - | 2443011 - 2443865 | 31545.6 |
| lysr family transcriptional regulator | EUB48_11785 | P43011 | - | 2443886 - 2444794 | 32917.0 |
| glyoxylate carboligase | EUB48_11790 | P0AEP8 | + | 2444932 - 2446731 | 65192.9 |
| hydroxypyruvate isomerase | EUB48_11795 | P30147 | + | 2446742 - 2447521 | 28624.2 |
| 2-hydroxy-3-oxopropionate reductase | EUB48_11800 | P77161 | + | 2447545 - 2448450 | 31123.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
