Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent sugar dehydrogenase | EUB48_11555 | P75804 | - | 2397302 - 2398444 | 41499.6 |
| oxidoreductase | EUB48_11560 | Q3J6K9 | - | 2398474 - 2399451 | 33909.1 |
| peptidoglycan endopeptidase | EUB48_11565 | P76190 | + | 2399652 - 2400272 | 22082.3 |
| voc family protein | EUB48_11570 | A4IS40 | + | 2400406 - 2400852 | 16078.0 |
| panthothenate synthetase | EUB48_11575 | Not Available | - | 2400864 - 2401169 | 11304.7 |
| gyd domain-containing protein | EUB48_11580 | Q5SI26 | - | 2401242 - 2401535 | 10519.7 |
| alanine dehydrogenase | EUB48_11585 | E1V931 | + | 2401920 - 2403008 | 37590.8 |
| acetate--coa ligase | EUB48_11590 | P39062 | + | 2403098 - 2404861 | 64115.0 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | EUB48_11595 | Q9R9N5 | + | 2404858 - 2405844 | 35404.4 |
| alpha-ketoacid dehydrogenase subunit beta | EUB48_11600 | Q38799 | + | 2405841 - 2406812 | 34844.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
