Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylacetate 3-hydroxylase | EUB48_11505 | P55792 | + | 2386511 - 2388145 | 59622.0 |
| anti-sigma factor | EUB48_11510 | Not Available | - | 2388148 - 2388789 | 22952.2 |
| sigma-70 family rna polymerase sigma factor | EUB48_11515 | Q06198 | - | 2388939 - 2389511 | 21451.7 |
| metallophosphoesterase | EUB48_11520 | Q6NDI4 | + | 2389703 - 2390602 | 33093.9 |
| cytochrome c oxidase subunit ii | EUB48_11525 | P98052 | + | 2390612 - 2390974 | 12887.9 |
| dihydrolipoyl dehydrogenase | EUB48_11530 | Q9I1L9 | - | 2391028 - 2392437 | 49310.0 |
| 2-oxo acid dehydrogenase subunit e2 | EUB48_11535 | Q9I1M0 | - | 2392441 - 2393757 | 46343.2 |
| alpha-ketoacid dehydrogenase subunit beta | EUB48_11540 | Q9I1M1 | - | 2393757 - 2394797 | 37663.8 |
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | EUB48_11545 | Q9I1M2 | - | 2394800 - 2396035 | 45236.0 |
| llm class flavin-dependent oxidoreductase | EUB48_11550 | P0ADV6 | - | 2396259 - 2397248 | 35295.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
