Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | EUB48_10905 | Q129F0 | + | 2270659 - 2271372 | 25170.9 |
| nad-dependent protein deacetylase | EUB48_10910 | Q4UZX0 | - | 2271369 - 2272208 | 30005.7 |
| exodeoxyribonuclease i | EUB48_10915 | P04995 | - | 2272234 - 2273670 | 54030.1 |
| atp-dependent clp protease atp-binding subunit clpa | EUB48_10920 | P0ABI1 | - | 2273802 - 2276141 | 85497.0 |
| atp-dependent clp protease adapter clps | EUB48_10925 | C5CLL8 | - | 2276198 - 2276557 | 13238.0 |
| nadp-dependent isocitrate dehydrogenase | EUB48_10930 | Q02NB5 | - | 2276719 - 2277972 | 45564.1 |
| hypothetical protein | EUB48_10935 | Not Available | - | 2278210 - 2278467 | 8264.12 |
| duf192 domain-containing protein | EUB48_10940 | Not Available | + | 2278457 - 2278927 | 17246.2 |
| superoxide dismutase | EUB48_10945 | P37369 | - | 2279040 - 2279621 | 21471.3 |
| exodeoxyribonuclease vii large subunit | EUB48_10950 | A9BWI7 | - | 2279668 - 2281011 | 48353.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
