Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | EUB48_09755 | Q12B47 | + | 2024508 - 2026046 | 55334.5 |
| peptidase s11 | EUB48_09760 | P72161 | + | 2026164 - 2027255 | 39197.4 |
| iclr family transcriptional regulator | EUB48_09765 | P77300 | - | 2027261 - 2028055 | 29004.1 |
| arginyltransferase | EUB48_09770 | Q12B44 | - | 2028138 - 2028890 | 28724.2 |
| leucyl/phenylalanyl-trna--protein transferase | EUB48_09775 | Q21VY7 | - | 2028887 - 2029651 | 27937.4 |
| polysaccharide deacetylase family protein | EUB48_09780 | P94361 | - | 2029725 - 2030669 | 35118.6 |
| putative o-glycosylation ligase, exosortase a system-associated | EUB48_09785 | Not Available | - | 2030673 - 2031983 | 48498.2 |
| phenylacetate--coa ligase family protein | EUB48_09790 | P39860 | - | 2031976 - 2033319 | 49746.1 |
| glycosyltransferase | EUB48_09795 | O07147 | - | 2033316 - 2034035 | 26160.4 |
| is256 family transposase | EUB48_09800 | P80011 | - | 2034004 - 2035275 | 46661.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
