Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EUB48_09105 | Q2YK58 | - | 1889296 - 1890660 | 49883.6 |
| marr family transcriptional regulator | EUB48_09110 | O31564 | + | 1890977 - 1891390 | 16053.5 |
| mfs transporter | EUB48_09115 | A0LNN5 | + | 1891457 - 1892725 | 44473.7 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EUB48_09120 | O26715 | + | 1892728 - 1893276 | 18917.8 |
| alkaline phosphatase | EUB48_09125 | P42251 | + | 1893290 - 1894885 | 58645.8 |
| cupin domain-containing protein | EUB48_09130 | Not Available | - | 1894926 - 1895255 | 11501.3 |
| phosphoserine phosphatase serb | EUB48_09135 | Q12A06 | - | 1895259 - 1895993 | 26365.2 |
| transcription-repair coupling factor | EUB48_09140 | P30958 | - | 1895990 - 1899472 | 129540.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | EUB48_09145 | Q21YT7 | + | 1899554 - 1900246 | 24582.4 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | EUB48_09150 | Q21YT7 | + | 1900243 - 1900716 | 16439.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
