Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EUB48_07555 | Q8YC99 | + | 1574240 - 1575412 | 41523.2 |
| transglutaminase domain-containing protein | EUB48_07560 | P44103 | + | 1575907 - 1577031 | 40761.2 |
| divalent metal cation transporter | EUB48_07565 | Q9RPF2 | - | 1577085 - 1578353 | 44073.9 |
| pseudouridine synthase | EUB48_07570 | P72970 | - | 1578431 - 1579354 | 34612.7 |
| trna (guanosine(46)-n7)-methyltransferase trmb | EUB48_07575 | A1VRF7 | - | 1579417 - 1580148 | 26364.0 |
| trna glutamyl-q(34) synthetase gluqrs | EUB48_07580 | A1VRF5 | - | 1580145 - 1581101 | 33779.4 |
| fad-dependent oxidoreductase | EUB48_07585 | Q48MT7 | - | 1581116 - 1582192 | 38990.4 |
| lysr family transcriptional regulator | EUB48_07590 | P76369 | - | 1582253 - 1583194 | 33498.7 |
| pirin family protein | EUB48_07595 | P73623 | + | 1583301 - 1584002 | 25199.7 |
| doxx family protein | EUB48_07600 | P0AD47 | + | 1584085 - 1584495 | 14424.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
