Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | EUB48_07305 | Q9F9B2 | + | 1518695 - 1519693 | 33945.0 |
| abc transporter permease | EUB48_07310 | Q9F9B1 | + | 1519765 - 1520721 | 33205.8 |
| sugar abc transporter atp-binding protein | EUB48_07315 | Q9F9B0 | + | 1520721 - 1521524 | 29079.8 |
| hypothetical protein | EUB48_07320 | A3N2Y4 | + | 1521535 - 1521759 | 8096.98 |
| rok family transcriptional regulator | EUB48_07325 | D2PPN2 | + | 1521786 - 1522997 | 42865.3 |
| glucose-6-phosphate dehydrogenase | EUB48_07330 | A0QP90 | + | 1523157 - 1524623 | 54627.1 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | EUB48_07335 | Q59931 | + | 1524657 - 1526285 | 59505.2 |
| multidrug efflux protein | EUB48_07340 | Q57124 | - | 1526357 - 1529431 | 109692.0 |
| efflux rnd transporter periplasmic adaptor subunit | EUB48_07345 | Q57500 | - | 1529442 - 1530557 | 39568.9 |
| efflux transporter outer membrane subunit | EUB48_07350 | Q9KJC1 | - | 1530607 - 1532052 | 50948.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
