Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | EUB48_06205 | A1TLB7 | - | 1289643 - 1290560 | 34225.9 |
| aspartate aminotransferase family protein | EUB48_06210 | Q7VTJ7 | - | 1290557 - 1291783 | 43797.5 |
| duf3579 domain-containing protein | EUB48_06215 | Not Available | + | 1292004 - 1292321 | 11570.8 |
| 30s ribosomal protein s20 | EUB48_06220 | Q21WK7 | - | 1292425 - 1292724 | 10721.2 |
| murein biosynthesis integral membrane protein murj | EUB48_06225 | B4E9G3 | + | 1292841 - 1294400 | 55690.0 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | EUB48_06230 | O31404 | + | 1294589 - 1295563 | 33787.4 |
| alpha-ketoacid dehydrogenase subunit beta | EUB48_06235 | Q5SLR3 | + | 1295554 - 1296528 | 34649.1 |
| sdr family oxidoreductase | EUB48_06240 | A0A2H3D8Y2 | + | 1296541 - 1297287 | 25282.7 |
| trap transporter substrate-binding protein | EUB48_06245 | P44542 | + | 1297332 - 1298375 | 38296.0 |
| trap transporter large permease subunit | EUB48_06250 | P40800 | + | 1298445 - 1300304 | 65783.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
