Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax sediminis
Accession NumberCP035503.1
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase 2 family protein | EUB48_05355 | Q6N140 | + | 1107999 - 1108868 | 33946.7 |
| collagen-like protein | EUB48_05360 | Not Available | - | 1109133 - 1109504 | 11313.9 |
| hypothetical protein | EUB48_05365 | Not Available | - | 1110063 - 1110425 | 13161.2 |
| hypothetical protein | EUB48_05370 | Not Available | - | 1110537 - 1111910 | 51552.2 |
| vwa domain-containing protein | EUB48_05375 | A4T9I4 | - | 1111941 - 1112996 | 37231.8 |
| duf58 domain-containing protein | EUB48_05380 | P9WLX4 | - | 1113021 - 1114016 | 36724.1 |
| aaa family atpase | EUB48_05385 | P94474 | - | 1114024 - 1115034 | 36926.9 |
| trypsin-like serine protease | EUB48_05390 | O22609 | - | 1115047 - 1115937 | 30605.2 |
| tatd family deoxyribonuclease | EUB48_05395 | P39408 | + | 1116053 - 1116898 | 30680.1 |
| dna-deoxyinosine glycosylase | EUB48_05400 | Q46EH7 | + | 1116987 - 1117484 | 18544.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
