Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | PQ457_03635 | Q55168 | + | 793188 - 794276 | 39964.5 |
| pas domain-containing sensor histidine kinase | PQ457_03640 | P26489 | + | 794558 - 795670 | 41135.4 |
| response regulator | PQ457_03645 | G7WMP8 | + | 795663 - 796085 | 15534.6 |
| response regulator | PQ457_03650 | P0C0F6 | + | 796098 - 798125 | 73912.9 |
| tigr00730 family rossman fold protein | PQ457_03655 | P48636 | + | 798453 - 799034 | 20846.4 |
| phytoene/squalene synthase family protein | PQ457_03660 | P22872 | + | 799031 - 799981 | 33185.8 |
| hypothetical protein | PQ457_03665 | Not Available | - | 800066 - 800332 | 9347.91 |
| multidrug effflux mfs transporter | PQ457_03670 | P28246 | - | 800562 - 801815 | 44870.2 |
| urca family protein | PQ457_03675 | Not Available | + | 802067 - 802468 | 14293.2 |
| dna polymerase iv | PQ457_03680 | Q92XH8 | + | 802545 - 803663 | 40582.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.