Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | PQ457_03385 | P64588 | + | 743061 - 743765 | 24752.6 |
| c-type cytochrome | PQ457_03390 | Q4UEA0 | + | 744015 - 744413 | 13540.8 |
| tonb family protein | PQ457_03395 | Not Available | + | 744492 - 745181 | 22671.1 |
| duf2721 domain-containing protein | PQ457_03400 | Not Available | + | 745235 - 745675 | 16314.7 |
| type ii secretion system f family protein | PQ457_03405 | Not Available | - | 746086 - 747105 | 37078.8 |
| type ii secretion system f family protein | PQ457_03410 | Not Available | - | 747118 - 748089 | 35441.1 |
| pilus assembly protein cpae | PQ457_03415 | Not Available | - | 748091 - 749377 | 45472.7 |
| cpad family pilus assembly lipoprotein | PQ457_03420 | Not Available | - | 749381 - 750025 | 21962.9 |
| type ii and iii secretion system protein family protein | PQ457_03425 | P55702 | - | 750040 - 751752 | 58595.1 |
| flp pilus assembly protein cpab | PQ457_03430 | Not Available | - | 751769 - 752881 | 37712.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.