Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_02535 | Not Available | + | 542866 - 544011 | 41394.0 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | PQ457_02540 | Q5E8M6 | + | 544259 - 545446 | 40908.0 |
| dutp diphosphatase | PQ457_02545 | A5VG00 | + | 545439 - 545903 | 15925.2 |
| hypothetical protein | PQ457_02550 | Not Available | + | 545996 - 546454 | 16537.0 |
| duf4136 domain-containing protein | PQ457_02555 | Not Available | - | 546523 - 547176 | 23492.7 |
| tryptophan--trna ligase | PQ457_02560 | Q9AC05 | - | 547393 - 548409 | 36578.7 |
| murein biosynthesis integral membrane protein murj | PQ457_02565 | O05467 | - | 548415 - 549992 | 56297.0 |
| protein-export chaperone secb | PQ457_02570 | Q2GAU0 | - | 550061 - 550579 | 18692.9 |
| tim44/tima family putative adaptor protein | PQ457_02575 | O05965 | + | 550847 - 551506 | 23999.6 |
| murein transglycosylase a | PQ457_02580 | P0A936 | + | 551609 - 552847 | 44055.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.