Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zincin-like metallopeptidase domain-containing protein | PQ457_01885 | P55426 | + | 403412 - 404290 | 31834.5 |
| hypothetical protein | PQ457_01890 | Not Available | - | 404349 - 404657 | 10560.7 |
| hypothetical protein | PQ457_01895 | Not Available | - | 404668 - 406023 | 49348.1 |
| hypothetical protein | PQ457_01900 | Not Available | - | 406271 - 407287 | 38068.7 |
| hypothetical protein | PQ457_01905 | Not Available | - | 407292 - 410804 | 131755.0 |
| helicase-related protein | PQ457_01910 | P54509 | - | 410832 - 413957 | 119223.0 |
| fic family protein | PQ457_01915 | Q9BVA6 | + | 414197 - 415306 | 41303.2 |
| hypothetical protein | PQ457_01920 | Not Available | + | 415781 - 415918 | 4602.68 |
| sdr family oxidoreductase | PQ457_01925 | A0A084R1K2 | + | 415945 - 416658 | 24184.1 |
| ethd family reductase | PQ457_01930 | Not Available | + | 416677 - 417285 | 21786.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.