Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3237 domain-containing protein | PQ457_20445 | B3Q9N8 | - | 1024751 - 1025242 | 17360.2 |
| ycei family protein | PQ457_20450 | P75925 | - | 1025261 - 1026499 | 43502.1 |
| ycei family protein | PQ457_20455 | A4W969 | - | 1026503 - 1027102 | 21079.3 |
| k(+)-transporting atpase subunit f | PQ457_20460 | Not Available | + | 1027542 - 1027631 | 3206.19 |
| potassium-transporting atpase subunit kdpa | PQ457_20465 | B8I9I5 | + | 1027657 - 1029348 | 58962.6 |
| potassium-transporting atpase subunit kdpb | PQ457_20470 | Q8U9D9 | + | 1029361 - 1031370 | 69694.7 |
| potassium-transporting atpase subunit kdpc | PQ457_20475 | Q98GX7 | + | 1031383 - 1031961 | 19563.7 |
| sensor histidine kinase kdpd | PQ457_20480 | P21865 | + | 1031969 - 1034632 | 94842.0 |
| response regulator transcription factor | PQ457_20485 | P9WGN0 | + | 1034643 - 1035326 | 24586.0 |
| duf1905 domain-containing protein | PQ457_20490 | Not Available | + | 1035416 - 1035730 | 11353.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.