Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Major capsid protein precursor | PQ457_10250 | Not Available | + | 2186768 - 2187928 | 40785.4 |
| Tail fiber protein | PQ457_10255 | Not Available | + | 2188129 - 2190021 | 66931.8 |
| Attr | Not Available | Not Available | + | 2191547 - 2191597 | Not Available |
| Attr | Not Available | Not Available | + | 2201514 - 2201527 | Not Available |
| kinase/pyrophosphorylase | PQ457_00010 | Q2GC57 | - | 445 - 1287 | 30955.0 |
| uroporphyrinogen decarboxylase | PQ457_00015 | Q2GC56 | + | 1616 - 2641 | 37075.6 |
| copd family protein | PQ457_00020 | Q53229 | + | 2743 - 3186 | 16738.2 |
| transcription termination factor rho | PQ457_00025 | P52156 | + | 3580 - 4836 | 46724.3 |
| duf6489 family protein | PQ457_00030 | Not Available | + | 5153 - 5398 | 8897.87 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | PQ457_00035 | Q2N6I9 | + | 5411 - 6688 | 44789.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.